Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888108.1_cds_XP_016442644.1_37885
CDS Infomation

[gene=LOC107768047] [db_xref=GeneID:107768047] [protein=beta-arabinofuranosyltransferase RAY1 isoform X5] [protein_id=XP_016442644.1] [location=join(7652..7738,8295..8508,9632..9681,9773..10540,10761..11007,11223..11665)] [gbkey=CDS]
Sequence

ATGAAAATCTCTAATCCCTTATTCTTATCACTAACAACAATGAACTTCTTTCAATCTATT
ATCTTCCCATTTCTCTACAACAACAAGGTCAGATACTTTTGGATGGTCCAACTATTACCA
TATTTACAGCGCCAAGGCCTTTTGTGGGTTCCATTGGGGAAAGGCAGGCTCTTGCTGTTC
GATCTTGGCTTGGCTTATCACCAGACATTACTGTTGTTCTGTTCAGCCAACAACCTTCTG
TTTTCTCCTTTGCTGAATTATTTAGTCCCCGCGTCTCAGTTGATCCCAACATCGATTTCA
CATGGAAAACATTGGCTTCAAGATGATGGAAGCCGAGTGAAGACCCGAAAGGATTTCGTT
TCACAAGATTGGAAATGGAACCTTTGTGACGGAAAAATGCTAATAGCTTGGAACAATGGA
GATCTTCCGTTGCATAAAGGAGTCCTCCCCCCATTTCTATATGGAAAGGGGCTTCATAAC
CGCTGGCTTATAAATGAAGCTCTGCTCTCTGATTTCAGATTTGTCTTTGATGCTAGTTGG
TCCATATCCAATTTGAACCTTAATGATCTTGACCAGGATTTCAATCGCACAAGTGAAGAT
TTTCTTGGCCTGGCTACTGGAAAAAGGTTTTGGGAAGTGACGGGGAACTCCAATTTAGCA
ATGCTTTATGGATCATTATATTTCCATGAACAGAACTTCTCTAACATATTTAGACTTTTT
CAGTGTGGAGGAGACTATCTCTTCGTAAATTCTGCAAAAATGGTTGTTTACCCTTTGAGG
TACAAAGGATCATTGAGTTTAAGAAAACAAGTTATGTCCAAGTCAACAAGAGAGAAGAAA
ACTTTGGAATGCGTTGATACTATCAGATCAACTAAGGGGGCTAATGACTGCTCTGTGGAG
GACTACTGGACTGTGTCGACGCCAATTTCGCTTCCTTTATCTTTAGATATATTACTGTCA
CTTCGTGCAGACAAAAATAAGACAGTTGTGCTAGCAGTTGTTGGGTATAGTTACAAAGAG
ATGCTAATGAGTTGGGTCTGCAGGCTGAACCATCTCCAGATCTCTAACTTTTTGGTCTGT
GCTCTTGACGATAATATATATGATTTCTCCATCTTGCAGGGCCTTCCCGTCTTCAAGTAT
GCCAATCTTGAAACCAAGATCAGCTTCGACAACTGTCATTTTGGAACTGAATGCTTTCAA
AAAGTAACCAAAGTTAAGTCCAGAATCGTTCTGCAGATACTGAAGCTTGGTTACAATGTA
TTAATGAGCGATGTTGACATTTATTGGTTCAAGAATCCACTTCCCTTGCTTAGCTCATTT
GGCCCGGCAGTTCTTGTGGCACAATCAGATGAATACAAGTTGACAGGACCTATAAACTTA
CCTCGACGTCTGAATTCTGGTTTCTATTATGCTTATTCGGATGTTACGACTATTGCTGCT
CTTGAGAAGGTTGTGAAGCATGCAGCAAACTCAAATCTTTCTGAGCAACCAAGCTTCTAT
GATACTTTGTGCGGGGAAGGTGGATACAATCGCATAGATGATAGCAGATGCTTAGAACCT
CAAACGAATGTGACCGTTCAATTCCTGGACAGAGACCTCTTTCCGAATGGCGCATACAAA
GATCTTTGGCAAGAAAGCAATGTGAAGGAAGCCTGTTTGATGAAGGGCTGTTTTATTATT
CATAACAACTGGATTAGTGGGAGAAGGAAAAAGCTAGAACGTCAAGTGCCATCAGGGCTC
TGGGAATACGATATGAGCACAAGAATGTGTTTGCAGACGTGGCACAAGACAAAAGTTGTG
TATTTTTGA

Peptide Sequence

PEP ID

XP_016442644.1
PEP Infomation

PREDICTED: beta-arabinofuranosyltransferase RAY1 isoform X5 [Nicotiana tabacum]
Sequence

MKISNPLFLSLTTMNFFQSIIFPFLYNNKVRYFWMVQLLPYLQRQGLLWVPLGKGRLLLF
DLGLAYHQTLLLFCSANNLLFSPLLNYLVPASQLIPTSISHGKHWLQDDGSRVKTRKDFV
SQDWKWNLCDGKMLIAWNNGDLPLHKGVLPPFLYGKGLHNRWLINEALLSDFRFVFDASW
SISNLNLNDLDQDFNRTSEDFLGLATGKRFWEVTGNSNLAMLYGSLYFHEQNFSNIFRLF
QCGGDYLFVNSAKMVVYPLRYKGSLSLRKQVMSKSTREKKTLECVDTIRSTKGANDCSVE
DYWTVSTPISLPLSLDILLSLRADKNKTVVLAVVGYSYKEMLMSWVCRLNHLQISNFLVC
ALDDNIYDFSILQGLPVFKYANLETKISFDNCHFGTECFQKVTKVKSRIVLQILKLGYNV
LMSDVDIYWFKNPLPLLSSFGPAVLVAQSDEYKLTGPINLPRRLNSGFYYAYSDVTTIAA
LEKVVKHAANSNLSEQPSFYDTLCGEGGYNRIDDSRCLEPQTNVTVQFLDRDLFPNGAYK
DLWQESNVKEACLMKGCFIIHNNWISGRRKKLERQVPSGLWEYDMSTRMCLQTWHKTKVV
YF

Transcript Sequence

Gene sequence data has not been registered.